Update upstream source from tag 'upstream/2.0.0'

Update to upstream version '2.0.0'
with Debian dir e866e6e75661017faaa5331becda76021407390b

17 files changed, 10 insertions, 0 deletions

diff --git a/cgats/Jamfile b/cgats/Jamfile
index 813269a..813269a 100644..100755
--- a/cgats/Jamfile
+++ b/cgats/Jamfile
diff --git a/cgats/License4.txt b/cgats/License4.txt
index 6db70c8..6db70c8 100644..100755
--- a/cgats/License4.txt
+++ b/cgats/License4.txt
diff --git a/cgats/Makefile b/cgats/Makefile
index 5312104..5312104 100644..100755
--- a/cgats/Makefile
+++ b/cgats/Makefile
diff --git a/cgats/Makefile.IBMNT b/cgats/Makefile.IBMNT
index 26a2bd2..26a2bd2 100644..100755
--- a/cgats/Makefile.IBMNT
+++ b/cgats/Makefile.IBMNT
diff --git a/cgats/Makefile.OSX b/cgats/Makefile.OSX
index fb1c88f..fb1c88f 100644..100755
--- a/cgats/Makefile.OSX
+++ b/cgats/Makefile.OSX
diff --git a/cgats/Makefile.UNIX b/cgats/Makefile.UNIX
index 91d6005..91d6005 100644..100755
--- a/cgats/Makefile.UNIX
+++ b/cgats/Makefile.UNIX
diff --git a/cgats/Makefile.WNT b/cgats/Makefile.WNT
index 4ca291d..4ca291d 100644..100755
--- a/cgats/Makefile.WNT
+++ b/cgats/Makefile.WNT
diff --git a/cgats/Readme.txt b/cgats/Readme.txt
index 89c554e..89c554e 100644..100755
--- a/cgats/Readme.txt
+++ b/cgats/Readme.txt
diff --git a/cgats/afiles b/cgats/afiles
index 5532110..5532110 100644..100755
--- a/cgats/afiles
+++ b/cgats/afiles
diff --git a/cgats/cgats.c b/cgats/cgats.c
index 3741a5d..578da10 100644..100755
--- a/cgats/cgats.c
+++ b/cgats/cgats.c
@@ -135,6 +135,7 @@ cgatsAlloc *al			/* memory allocator */
 	p->add_other  = add_other;
 	p->get_oi     = get_oi;
 	p->add_kword  = add_kword;
+	p->add_kword_at = add_kword_at;
 	p->add_field  = add_field;
 	p->add_set    = add_set;
 	p->add_setarr = add_setarr;
diff --git a/cgats/cgats.h b/cgats/cgats.h
index bf5c94e..9ef5f7f 100644..100755
--- a/cgats/cgats.h
+++ b/cgats/cgats.h
@@ -132,6 +132,9 @@ struct _cgats {
 	int (*add_kword)(struct _cgats *p, int table, const char *ksym, const char *kdata, const char *kcom);
 						/* Add a new keyword/value pair + optional comment to the table */
 						/* Return index of new keyword, or -1, errc & err on error */
+	int (*add_kword_at)(struct _cgats *p, int table, int pos, const char *ksym,
+	                                      const char *kdata, const char *kcom);
+						/* Replace or append a new keyword/value pair + optional comment */
 	int (*add_field)(struct _cgats *p, int table, const char *fsym, data_type ftype);
 						/* Add a new field to the table */
 						/* Return index of new field, or -1, -2, errc and err on error */
diff --git a/cgats/cgatsstd.c b/cgats/cgatsstd.c
index 22c17ed..22c17ed 100644..100755
--- a/cgats/cgatsstd.c
+++ b/cgats/cgatsstd.c
diff --git a/cgats/makezip.ksh b/cgats/makezip.ksh
index 8cc5f6c..8cc5f6c 100644..100755
--- a/cgats/makezip.ksh
+++ b/cgats/makezip.ksh
diff --git a/cgats/pars.c b/cgats/pars.c
index c3038d5..d4d04bf 100644..100755
--- a/cgats/pars.c
+++ b/cgats/pars.c
@@ -17,6 +17,12 @@
  * see the License4.txt file in this directory for licensing details.
  */
 
+/*
+	TTBD:
+
+	Should skip UTF-8 BOM (0xef 0xbb 0xbf)
+
+*/
 
 #define _PARS_C_				/* Turn on implimentation code */
 
diff --git a/cgats/pars.h b/cgats/pars.h
index 083a745..083a745 100644..100755
--- a/cgats/pars.h
+++ b/cgats/pars.h
diff --git a/cgats/parsstd.c b/cgats/parsstd.c
index 2246c97..2246c97 100644..100755
--- a/cgats/parsstd.c
+++ b/cgats/parsstd.c
diff --git a/cgats/test.txt b/cgats/test.txt
index 5036d32..5036d32 100644..100755
--- a/cgats/test.txt
+++ b/cgats/test.txt